SubtiBank SubtiBank
Version comparison:

2017-12-15 18:20:192025-05-27 15:27:41

description

transcriptional repressor (Xre family) of rapD, rapG, rapH and yvaM

transcriptional repressor ([SW|Xre family]) of [[gene|rapD]], [[gene|rapG]], [[gene|rapH ]]and [[gene|yvaM]]

locus

BSU33660

BSU_33660

geneLength

405

408

function

regulation of sporulation initiation

regulation of [SW|sporulation ]initiation

product

transcriptional repressor (Xre family)

transcriptional repressor ([SW|Xre family])

ec

outlinks

bsu

BSU33660

BSU_33660

Gene

Coordinates

3,456,667 → 3,457,074

3,456,667 3,457,074

Biological materials

Mutant

MGNA-A492 (yvaN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/492 NBRP B. subtilis, Japan]

BKE33660 (Δ[[gene|rghR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATATCTCACCCCGTCCC, downstream forward: _UP4_TGACTCTTGATAGAAATGTG

BKK33660 (Δ[[gene|rghR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATATCTCACCCCGTCCC, downstream forward: _UP4_TGACTCTTGATAGAAATGTG

MGNA-A492 (yvaN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/492 NBRP B. subtilis, Japan]

BKE33660 ([[gene|rghR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATATCTCACCCCGTCCC, downstream forward: _UP4_TGACTCTTGATAGAAATGTG

BKK33660 ([[gene|rghR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATATCTCACCCCGTCCC, downstream forward: _UP4_TGACTCTTGATAGAAATGTG

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|HTH cro/C1-type domain] (aa 8-63) (according to UniProt)

The protein

additional information

information on binding sites can be found in the [http://www.prodoric2.de/detail.php?acc=MX000196 PRODORIC2 database]